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VIM-1 carbapenemase-producing Escherichia coli isolated from retail seafood, Germany 2016
- Nicole Roschanski1 , Sebastian Guenther1 , Thi Thu Tra Vu2 , Jennie Fischer3 , Torsten Semmler4 , Stephan Huehn2,5 , Thomas Alter2 , Uwe Roesler1
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View Affiliations Hide AffiliationsAffiliations: 1 Freie Universitaet Berlin, Institute for Animal Hygiene and Environmental Health, Berlin, Germany 2 Freie Universitaet Berlin, Institute of Food Safety and Food Hygiene, Berlin, Germany 3 Federal Institute for Risk Assessment, Department Biological Safety, Berlin, Germany 4 Robert Koch Institute, Berlin, Germany 5 Beuth University of Applied Sciences, Life Science and Technology, Berlin, GermanyNicole Roschanskinicole.roschanski fu-berlin.de
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Citation style for this article: Roschanski Nicole, Guenther Sebastian, Vu Thi Thu Tra, Fischer Jennie, Semmler Torsten, Huehn Stephan, Alter Thomas, Roesler Uwe. VIM-1 carbapenemase-producing Escherichia coli isolated from retail seafood, Germany 2016. Euro Surveill. 2017;22(43):pii=17-00032. https://doi.org/10.2807/1560-7917.ES.2017.22.43.17-00032 Received: 10 Jan 2017; Accepted: 15 May 2017
Abstract
Carbapenems belong to the group of last resort antibiotics in human medicine. Therefore, the emergence of growing numbers of carbapenemase-producing bacteria in food-producing animals or the environment is worrying and an important concern for the public health sector. In the present study, a set of 45 Enterobacteriaceae isolated from German retail seafood (clams and shrimps), sampled in 2016, were investigated by real-time PCR for the presence of carbapenemase-producing bacteria. One Escherichia coli (ST10), isolated from a Venus clam (Ruditapes philippinarum) harvested in the Mediterranean Sea (Italy), contained the carbapenemase gene blaVIM-1 as part of the variable region of a class I integron. Whole-genome sequencing indicated that the integron was embedded in a Tn3-like transposon that also contained the fluoroquinolone resistance gene qnrS1. Additional resistance genes such as the extended-spectrum beta-lactamase blaSHV-12 and the AmpC gene blaACC-1 were also present in this isolate. Except blaACC-1, all resistance genes were located on an IncY plasmid. These results confirm previous observations that carbapenemase-producing bacteria have reached the food chain and are of increasing concern for public health.
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