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/content/10.2807/1560-7917.ES.2017.22.23.30547
2017-06-08
2024-11-21
http://instance.metastore.ingenta.com/content/10.2807/1560-7917.ES.2017.22.23.30547
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References

  1. Didelot X, Bowden R, Wilson DJ, Peto TE, Crook DW. Transforming clinical microbiology with bacterial genome sequencing. Nat Rev Genet. 2012;13(9):601-12.  https://doi.org/10.1038/nrg3226  PMID: 22868263 
  2. Deurenberg RH, Bathoorn E, Chlebowicz MA, Couto N, Ferdous M, García-Cobos S, et al. Application of next generation sequencing in clinical microbiology and infection prevention. J Biotechnol. 2017;243:16-24.  https://doi.org/10.1016/j.jbiotec.2016.12.022  PMID: 28042011 
  3. The INFOSAN Activity Report 2014/2015 [Internet]. Geneva: World Health Organization; Geneva. Available from: http://www.who.int/foodsafety/publications/infosan_activity2014-15/en/
  4. Ronholm J, Nasheri N, Petronella N, Pagotto F. Navigating microbiological food safety in the era of whole-genome sequencing. Clin Microbiol Rev. 2016;29(4):837-57.  https://doi.org/10.1128/CMR.00056-16  PMID: 27559074 
  5. Moran-Gilad J, Sintchenko V, Pedersen SK, Wolfgang WJ, Pettengill J, Strain E, et al. Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities. BMC Infect Dis. 2015;15(1):174.  https://doi.org/10.1186/s12879-015-0902-3  PMID: 25887164 
  6. Maiden MC, Jansen van Rensburg MJ, Bray JE, Earle SG, Ford SA, Jolley KA, et al. MLST revisited: the gene-by-gene approach to bacterial genomics. Nat Rev Microbiol. 2013;11(10):728-36.  https://doi.org/10.1038/nrmicro3093  PMID: 23979428 
  7. Moran-Gilad J, Prior K, Yakunin E, Harrison TG, Underwood A, Lazarovitch T, et al. Design and Application of a Core Genome Multi-Locus Sequence Typing Scheme for Investigation of Legionnaires’ Disease Incidents. Euro Surveill. 2015;20(14):21087.https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=PubMed&list_uids=25884146&dopt=Abstract PMID: 25884146 
  8. Swaminathan B, Gerner-Smidt P, Ng L-K, Lukinmaa S, Kam K-M, Rolando S, et al. Building PulseNet International: an interconnected system of laboratory networks to facilitate timely public health recognition and response to foodborne disease outbreaks and emerging foodborne diseases. Foodborne Pathog Dis. 2006;3(1):36-50.  https://doi.org/10.1089/fpd.2006.3.36  PMID: 16602978 
  9. Nadon C, Van Walle I, Gerner-Smidt P, Campos J, Chinen I, Concepcion-Acevedo J, et al. PulseNet International: Vision for the implementation of whole genome sequencing (WGS) for global food-borne disease surveillance. Euro Surveill. 2017;22(23):30544.  https://doi.org/10.2807/1560-7917.ES.2017.22.23.30544 
  10. Oberle M, Wohlwend N, Jonas D, Maurer FP, Jost G, Tschudin-Sutter S, et al. The Technical and Biological Reproducibility of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) Based Typing: Employment of Bioinformatics in a Multicenter Study. PLoS One. 2016;11(10):e0164260.  https://doi.org/10.1371/journal.pone.0164260  PMID: 27798637 
  11. Schlaberg R, Chiu CY, Miller S, Procop GW, Weinstock GProfessional Practice Committee and Committee on Laboratory Practices of the American Society for MicrobiologyMicrobiology Resource Committee of the College of American Pathologists. Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection. Arch Pathol Lab Med. 2017;141(6):776-86.  https://doi.org/10.5858/arpa.2016-0539-RA  PMID: 28169558 
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