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Global distribution and environmental suitability for chikungunya virus, 1952 to 2015
- Elaine O Nsoesie1,2,3,4 , Moritz UG Kraemer2,5 , Nick Golding6,7 , David M Pigott4,6 , Oliver J Brady6 , Catherine L Moyes6 , Michael A Johansson8,9 , Peter W Gething10 , Raman Velayudhan11 , Kamran Khan12 , Simon I Hay4,6,13 , John S Brownstein1,3,13,14
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View Affiliations Hide AffiliationsAffiliations: 1 Children’s Hospital Informatics Program, Boston Children’s Hospital, Boston, United States 2 These authors contributed equally to this manuscript as first authors 3 Department of Pediatrics, Harvard Medical School, Boston, United States 4 Institute of Health Metrics and Evaluation, University of Washington, Seattle, United States 5 Spatial Ecology and Epidemiology Group, Department of Zoology, University of Oxford, United Kingdom 6 Oxford Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, United Kingdom 7 Department of BioScience, University of Melbourne, Australia 8 Centers for Disease Control and Prevention, San Juan, Puerto Rico 9 Center for Communicable Disease Dynamics, Harvard T. H. Chan School of Public Health, Boston, United States 10 Malaria Atlas Project, Oxford Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, United Kingdom 11 World Health Organization, Geneva, Switzerland 12 Li Ka Shing Knowledge Institute, Division of Infectious Diseases, St Michael's Hospital, Toronto, Canada 13 These authors contributed equally to the manuscript as last authors 14 Department of Epidemiology, Biostatistics and Occupational Health, McGill University, Montreal, CanadaElaine O. Nsoesieen22 uw.edu, Moritz U.G. Kraemermoritz.kraemer zoo.ox.ac.uk
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Citation style for this article: Nsoesie Elaine O, Kraemer Moritz UG, Golding Nick, Pigott David M, Brady Oliver J, Moyes Catherine L, Johansson Michael A, Gething Peter W, Velayudhan Raman, Khan Kamran, Hay Simon I, Brownstein John S. Global distribution and environmental suitability for chikungunya virus, 1952 to 2015. Euro Surveill. 2016;21(20):pii=30234. https://doi.org/10.2807/1560-7917.ES.2016.21.20.30234 Received: 21 Sept 2015; Accepted: 20 Mar 2016
Abstract
Chikungunya fever is an acute febrile illness caused by the chikungunya virus (CHIKV), which is transmitted to humans by Aedes mosquitoes. Although chikungunya fever is rarely fatal, patients can experience debilitating symptoms that last from months to years. Here we comprehensively assess the global distribution of chikungunya and produce high-resolution maps, using an established modelling framework that combines a comprehensive occurrence database with bespoke environmental correlates, including up-to-date Aedes distribution maps. This enables estimation of the current total population-at-risk of CHIKV transmission and identification of areas where the virus may spread to in the future. We identified 94 countries with good evidence for current CHIKV presence and a set of countries in the New and Old World with potential for future CHIKV establishment, demonstrated by high environmental suitability for transmission and in some cases previous sporadic reports. Aedes aegypti presence was identified as one of the major contributing factors to CHIKV transmission but significant geographical heterogeneity exists. We estimated 1.3 billion people are living in areas at-risk of CHIKV transmission. These maps provide a baseline for identifying areas where prevention and control efforts should be prioritised and can be used to guide estimation of the global burden of CHIKV.
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References
-
Weaver SC, Lecuit M. Chikungunya virus and the global spread of a mosquito-borne disease. N Engl J Med. 2015;372(13):1231-9. https://doi.org/10.1056/NEJMra1406035 PMID: 25806915
-
Ross RW. The Newala epidemic. III. The virus: isolation, pathogenic properties and relationship to the epidemic. J Hyg (Lond). 1956;54(2):177-91. https://doi.org/10.1017/S0022172400044442 PMID: 13346078
-
Powers AM, Logue CH. Changing patterns of chikungunya virus: re-emergence of a zoonotic arbovirus. J Gen Virol. 2007;88(Pt 9):2363-77. https://doi.org/10.1099/vir.0.82858-0 PMID: 17698645
-
Weaver SC. Arrival of chikungunya virus in the new world: prospects for spread and impact on public health. PLoS Negl Trop Dis. 2014;8(6):e2921. https://doi.org/10.1371/journal.pntd.0002921 PMID: 24967777
-
Volk SM, Chen R, Tsetsarkin KA, Adams AP, Garcia TI, Sall AA, et al. Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates. J Virol. 2010;84(13):6497-504. https://doi.org/10.1128/JVI.01603-09 PMID: 20410280
-
Staples JE, Breiman RF, Powers AM. Chikungunya fever: an epidemiological review of a re-emerging infectious disease. Clin Infect Dis. 2009;49(6):942-8. https://doi.org/10.1086/605496 PMID: 19663604
-
Chahar HS, Bharaj P, Dar L, Guleria R, Kabra SK, Broor S. Co-infections with chikungunya virus and dengue virus in Delhi, India. Emerg Infect Dis. 2009;15(7):1077-80. https://doi.org/10.3201/eid1507.080638 PMID: 19624923
-
Weaver SC. Arrival of chikungunya virus in the new world: prospects for spread and impact on public health. PLoS Negl Trop Dis. 2014;8(6):e2921. https://doi.org/10.1371/journal.pntd.0002921 PMID: 24967777
-
Chang LJ, Dowd KA, Mendoza FH, Saunders JG, Sitar S, Plummer SH, et al. VRC 311 Study Team. Safety and tolerability of chikungunya virus-like particle vaccine in healthy adults: a phase 1 dose-escalation trial. Lancet. 2014;384(9959):2046-52. https://doi.org/10.1016/S0140-6736(14)61185-5 PMID: 25132507
-
Johansson MA. Chikungunya on the move. Trends Parasitol. 2015;31(2):43-5. https://doi.org/10.1016/j.pt.2014.12.008 PMID: 25649340
-
Kraemer MUG, Hay SI, Pigott DM, Smith DL, Wint GRW, Golding N. Progress and Challenges in Infectious Disease Cartography. Trends Parasitol. 2016;32(1):19-29. https://doi.org/10.1016/j.pt.2015.09.006 PMID: 26604163
-
Bhatt S, Gething PW, Brady OJ, Messina JP, Farlow AW, Moyes CL, et al. The global distribution and burden of dengue. Nature. 2013;496(7446):504-7. https://doi.org/10.1038/nature12060 PMID: 23563266
-
Brady OJ, Gething PW, Bhatt S, Messina JP, Brownstein JS, Hoen AG, et al. Refining the global spatial limits of dengue virus transmission by evidence-based consensus. PLoS Negl Trop Dis. 2012;6(8):e1760. https://doi.org/http://dx.doi.org/10.1371/journal.pntd.0001760
-
Messina JP, Kraemer MU, Brady OJ, Pigott DM, Shearer FM, Weiss DJ, et al. Mapping global environmental suitability for Zika virus. eLife. 2016;5:e15272. https://doi.org/10.7554/eLife.15272 PMID: 27090089
-
Pigott DM, Bhatt S, Golding N, Duda KA, Battle KE, Brady OJ, et al. Global distribution maps of the leishmaniases. eLife. 2014;3. https://doi.org/10.7554/eLife.02851 PMID: 24972829
-
Messina JP, Brady OJ, Pigott DM, Brownstein JS, Hoen AG, Hay SI. A global compendium of human dengue virus occurrence. Sci Data. 2014;1:140004. https://doi.org/10.1038/sdata.2014.4 PMID: 25977762
-
Kraemer MU, Sinka ME, Duda KA, Mylne AQ, Shearer FM, Barker CM, et al. The global distribution of the arbovirus vectors Aedes aegypti and Ae. albopictus. eLife. 2015;4:e08347. https://doi.org/10.7554/eLife.08347 PMID: 26126267
-
Gérardin P, Guernier V, Perrau J, Fianu A, Le Roux K, Grivard P, et al. Estimating Chikungunya prevalence in La Réunion Island outbreak by serosurveys: two methods for two critical times of the epidemic. BMC Infect Dis. 2008;8(1):99. https://doi.org/10.1186/1471-2334-8-99 PMID: 18662384
-
Nitatpattana N, Kanjanopas K, Yoksan S, Satimai W, Vongba N, Langdatsuwan S, et al. Long-term persistence of Chikungunya virus neutralizing antibodies in human populations of North Eastern Thailand. Virol J. 2014;11(1):183. https://doi.org/10.1186/1743-422X-11-183 PMID: 25330992
-
Phillips SJ, Dudík M, Elith J, Graham CH, Lehmann A, Leathwick J, et al. Sample selection bias and presence-only distribution models: implications for background and pseudo-absence data. Ecol Appl. 2009;19(1):181-97. https://doi.org/10.1890/07-2153.1 PMID: 19323182
-
Kraemer MU, Sinka ME, Duda KA, Mylne A, Shearer FM, Brady OJ, et al. The global compendium of Aedes aegypti and Ae. albopictus occurrence. Sci Data. 2015;2:150035. https://doi.org/10.1038/sdata.2015.35 PMID: 26175912
-
Brady OJ, Golding N, Pigott DM, Kraemer MU, Messina JP, Reiner RC Jr, et al. Global temperature constraints on Aedes aegypti and Ae. albopictus persistence and competence for dengue virus transmission. Parasit Vectors. 2014;7(1):338. https://doi.org/10.1186/1756-3305-7-338 PMID: 25052008
-
Weiss DJ, Atkinson PM, Bhatt S, Mappin B, Hay SI, Gething PW. An effective approach for gap-filling continental scale remotely sensed time-series. ISPRS J Photogramm Remote Sens. 2014;98:106-18. https://doi.org/10.1016/j.isprsjprs.2014.10.001 PMID: 25642100
-
Luz C, Tai MHH, Santos AH, Silva HHG. Impact of moisture on survival of Aedes aegypti eggs and ovicidal activity of Metarhizium anisopliae under laboratory conditions. Mem Inst Oswaldo Cruz. 2008;103(2):214-5. https://doi.org/10.1590/S0074-02762008000200016 PMID: 18425277
-
Estallo EL, Lamfri MA, Scavuzzo CM, Almeida FF, Introini MV, Zaidenberg M, et al. Models for predicting Aedes aegypti larval indices based on satellite images and climatic variables. J Am Mosq Control Assoc. 2008;24(3):368-76. https://doi.org/10.2987/5705.1 PMID: 18939688
-
Balk DL, Deichmann U, Yetman G, Pozzi F, Hay SI, Nelson A. Determining global population distribution: methods, applications and data. Adv Parasitol. 2006;62:119-56. https://doi.org/10.1016/S0065-308X(05)62004-0 PMID: 16647969
-
Uchida H, Nelson A. Agglomeration index: Towards a New Measure of Urban Concentration. Background paper for the World Bank's World Development Report. Washington D.C.: World Bank; 2009.
-
Demanou M, Antonio-Nkondjio C, Ngapana E, Rousset D, Paupy C, Manuguerra J-C, et al. Chikungunya outbreak in a rural area of Western Cameroon in 2006: A retrospective serological and entomological survey. BMC Res Notes. 2010;3(1):128. https://doi.org/10.1186/1756-0500-3-128 PMID: 20444282
-
Peyrefitte CN, Bessaud M, Pastorino BAM, Gravier P, Plumet S, Merle OL, et al. Circulation of Chikungunya virus in Gabon, 2006-2007. J Med Virol. 2008;80(3):430-3. https://doi.org/10.1002/jmv.21090 PMID: 18205212
-
Sudeep AB, Parashar D. Chikungunya: an overview. J Biosci. 2008;33(4):443-9. https://doi.org/10.1007/s12038-008-0063-2 PMID: 19208970
-
Schuffenecker I, Iteman I, Michault A, Murri S, Frangeul L, Vaney M-C, et al. Genome microevolution of chikungunya viruses causing the Indian Ocean outbreak. PLoS Med. 2006;3(7):e263. https://doi.org/10.1371/journal.pmed.0030263 PMID: 16700631
-
Fischer D, Thomas SM, Suk JE, Sudre B, Hess A, Tjaden NB, et al. Climate change effects on Chikungunya transmission in Europe: geospatial analysis of vector’s climatic suitability and virus’ temperature requirements. Int J Health Geogr. 2013;12(1):51. https://doi.org/10.1186/1476-072X-12-51 PMID: 24219507
-
Leparc-Goffart I, Nougairede A, Cassadou S, Prat C, de Lamballerie X. Chikungunya in the Americas. Lancet. 2014;383(9916):514. https://doi.org/10.1016/S0140-6736(14)60185-9 PMID: 24506907
-
Van Bortel W, Dorleans F, Rosine J, Blateau A, Rousset D, Matheus S, et al. Chikungunya outbreak in the Caribbean region, December 2013 to March 2014, and the significance for Europe. Euro Surveill. 2014;19(13):20759. https://doi.org/10.2807/1560-7917.ES2014.19.13.20759 PMID: 24721539
-
Pulmanausahakul R, Roytrakul S, Auewarakul P, Smith DR. Chikungunya in Southeast Asia: understanding the emergence and finding solutions. Int J Infect Dis. 2011;15(10):e671-6. https://doi.org/10.1016/j.ijid.2011.06.002 PMID: 21775183
-
Lanciotti RS, Valadere AM, .Transcontinental movement of Asian genotype chikungunya virus. Emerg Infect Dis. 2014;20(8):1400-2. https://doi.org/10.3201/eid2008.140268 PMID: 25076384
-
Azami NAM, Salleh SA, Shah SA, Neoh HM, Othman Z, Zakaria SZS, et al. Emergence of chikungunya seropositivity in healthy Malaysian adults residing in outbreak-free locations: chikungunya seroprevalence results from the Malaysian Cohort. BMC Infect Dis. 2013;13(1):67. https://doi.org/10.1186/1471-2334-13-67 PMID: 23379541
-
Pulmanausahakul R, Roytrakul S, Auewarakul P, Smith DR. Chikungunya in Southeast Asia: understanding the emergence and finding solutions. Int J Infect Dis. 2011;15(10):e671-6. https://doi.org/10.1016/j.ijid.2011.06.002 PMID: 21775183
-
Wu D, Wu J, Zhang Q, Zhong H, Ke C, Deng X, et al. Chikungunya outbreak in Guangdong Province, China, 2010. Emerg Infect Dis. 2012;18(3):493-5. https://doi.org/10.3201/eid1803.110034 PMID: 22377135
-
Pun SB, Bastola A, Shah R. First report of Chikungunya virus infection in Nepal. J Infect Dev Ctries. 2014;8(6):790-2. https://doi.org/10.3855/jidc.3701 PMID: 24916880
-
Wang J, Zhang H, Sun X, Fu S, Wang H, Feng Y, et al. Distribution of mosquitoes and mosquito-borne arboviruses in Yunnan Province near the China-Myanmar-Laos border. Am J Trop Med Hyg. 2011;84(5):738-46. https://doi.org/10.4269/ajtmh.2011.10-0294 PMID: 21540383
-
Wu J-Y, Lun Z-R, James AA, Chen X-G. Dengue Fever in mainland China. Am J Trop Med Hyg. 2010;83(3):664-71. https://doi.org/10.4269/ajtmh.2010.09-0755 PMID: 20810836
-
Nunes MRT, Faria NR, de Vasconcelos JM, Golding N, Kraemer MU, de Oliveira LF, et al. Emergence and potential for spread of Chikungunya virus in Brazil. BMC Med. 2015;13(102):102. https://doi.org/10.1186/s12916-015-0348-x PMID: 25976325
-
Jaenisch T, Junghanss T, Wills B, Brady OJ, Eckerle I, Farlow A, et al. Dengue in Africa Study Group. Dengue expansion in Africa-not recognized or not happening? Emerg Infect Dis. 2014;20(10):e140487. https://doi.org/10.3201/eid2010.140487 PMID: 25271370
-
Ledermann JP, Guillaumot L, Yug L, Saweyog SC, Tided M, Machieng P, et al. Aedes hensilli as a potential vector of Chikungunya and Zika viruses. PLoS Negl Trop Dis. 2014;8(10):e3188. https://doi.org/10.1371/journal.pntd.0003188 PMID: 25299181
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